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1

Topics in machine learning for biomedical literature analysis and text retrieval

Rezarta Islamaj Doğan, Lana Yeganova

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 151 KB

english, 2011

2

A context-blocks model for identifying clinical relationships in patient records

Rezarta Islamaj Doğan, Aurélie Névéol, Zhiyong Lu

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 689 KB

english, 2011

3

Structural footprinting in protein structure comparison: the impact of structural fragments

Elena Zotenko, Rezarta Islamaj Dogan, W John Wilbur, Dianne P O'Leary, Teresa M Przytycka

Journal:

BMC Structural Biology

Year:

2007

Language:

english

File:

PDF, 2.54 MB

english, 2007

4

An Evolutionary Algorithm Approach for Feature Generation from Sequence Data and Its Application to DNA Splice Site Prediction

Kamath, Uday, Compton, Jack, Islamaj-Doğan, Rezarta, De Jong, Kenneth A., Shehu, Amarda

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 980 KB

english, 2012

5

Semi-automatic semantic annotation of PubMed queries: A study on quality, efficiency, satisfaction

Aurélie Névéol, Rezarta Islamaj Doğan, Zhiyong Lu

Journal:

Journal of Biomedical Informatics

Year:

2011

Language:

english

File:

PDF, 863 KB

english, 2011

6

Features generated for computational splice-site prediction correspond to functional elements

Rezarta Islamaj Dogan, Lise Getoor, W John Wilbur, Stephen M Mount

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.60 MB

english, 2007

7

Topics in machine learning for biomedical literature analysis and text retrieval

Rezarta Islamaj Doğan, Lana Yeganova

Journal:

Journal of Biomedical Semantics

Year:

2012

Language:

english

File:

PDF, 82 KB

english, 2012

8

NCBI disease corpus: A resource for disease name recognition and concept normalization

Doğan, Rezarta Islamaj, Leaman, Robert, Lu, Zhiyong

Journal:

Journal of Biomedical Informatics

Year:

2014

Language:

english

File:

PDF, 1.09 MB

english, 2014

9

Author name disambiguation for PubMed

Liu, Wanli, Islamaj Doğan, Rezarta, Kim, Sun, Comeau, Donald C., Kim, Won, Yeganova, Lana, Lu, Zhiyong, Wilbur, W. John

Journal:

Journal of the Association for Information Science and Technology

Year:

2014

Language:

english

File:

PDF, 433 KB

english, 2014

10

[IEEE 2007 Seventh IEEE International Conference on Data Mining - Workshops (ICDM Workshops) - Omaha, NE, USA (2007.10.28-2007.10.31)] Seventh IEEE International Conference on Data Mining Workshops (ICDMW 2007) - Characterizing RNA Secondary-Structure Features and Their Effects on Splice-Site Prediction

Dogan, Rezarta Islamaj, Getoor, Lise, Wilbur, W. John

Year:

2007

Language:

english

File:

PDF, 851 KB

english, 2007

11

Extracting Rx information from clinical narrative

Mork, James G, Bodenreider, Olivier, Demner-Fushman, Dina, Doğan, Rezarta Islamaj, Lang, François-Michel, Lu, Zhiyong, Névéol, Aurélie, Peters, Lee, Shooshan, Sonya E, Aronson, Alan R

Journal:

Journal of the American Medical Informatics Association

Year:

2010

Language:

english

File:

PDF, 232 KB

english, 2010

12

Crowdsourcing and curation: perspectives from biology and natural language processing

Hirschman, Lynette, Fort, Karën, Boué, Stéphanie, Kyrpides, Nikos, Islamaj Doğan, Rezarta, Cohen, Kevin Bretonnel

Journal:

Year:

2016

Language:

english

File:

PDF, 1.01 MB

english, 2016

13

The BioC-BioGRID corpus: full text articles annotated for curation of protein–protein and genetic interactions

Islamaj Doğan, Rezarta, Kim, Sun, Chatr-aryamontri, Andrew, Chang, Christie S., Oughtred, Rose, Rust, Jennifer, Wilbur, W. John, Comeau, Donald C., Dolinski, Kara, Tyers, Mike

Journal:

Year:

2017

Language:

english

File:

PDF, 725 KB

english, 2017

14

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID

Kim, Sun, Islamaj Doğan, Rezarta, Chatr-Aryamontri, Andrew, Chang, Christie S., Oughtred, Rose, Rust, Jennifer, Batista-Navarro, Riza, Carter, Jacob, Ananiadou, Sophia, Matos, Sérgio, Santos, André, C

Journal:

Year:

2016

Language:

english

File:

PDF, 1.17 MB

english, 2016

15

PMC text mining subset in BioC: about 3 million full text articles and growing

Comeau, Donald C, Wei, Chih-Hsuan, Islamaj Doğan, Rezarta, Lu, Zhiyong, Wren, Jonathan

Journal:

Year:

2019

Language:

english

File:

PDF, 292 KB

english, 2019

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